34
name cyp.p type p35 charge 1.385
name cyp.o1p type o2 charge -0.847
name cyp.o2p type o2 charge -0.847
name cyp.o3p type o2 charge -0.847
name cyp.ho3p type hd  charge 0
name cyp.o3' type o3 charge -0.509
name cyp.ho3' type hd charge 0.310   
name cyp.o5' type o3 charge -0.509
name cyp.c5' type c3 charge 0.118
name cyp.h51' type h charge 0.021
name cyp.h52' type h charge 0.021
name cyp.c4' type c3 charge 0.036
name cyp.h4' type h charge 0.056
name cyp.o4' type o3 charge -0.368
name cyp.c1' type c3 charge 0.376
name cyp.h1' type h charge 0.009
name cyp.c2' type c3 charge -0.307
name cyp.h21' type h charge 0.081
name cyp.h22' type h charge 0.081
name cyp.c3' type c3 charge 0.233
name cyp.h3' type h charge 0.025
name cyp.n1 type nr charge -0.187 
name cyp.c2 type c2 charge 0.859
name cyp.o2 type o2 charge -0.508
name cyp.n3 type nr charge -0.860
name cyp.h3 type hd charge -0.860
name cyp.c4 type c2 charge 0.935
name cyp.n4 type n2 charge -0.834
name cyp.hn41 type hd charge 0.351
name cyp.hn42 type hd charge 0.351
name cyp.c5 type c2 charge -0.576
name cyp.h5 type h charge 0.153
name cyp.c6 type c2 charge 0.185
name cyp.h6 type h charge 0.098
33
cyp.p cyp.o1p 1.5
cyp.p cyp.o2p 1.5
cyp.p cyp.o3p 1.
cyp.o3p cyp.ho3p 1
cyp.p cyp.o5' 1
cyp.o5' cyp.c5' 1
cyp.c5' cyp.c4' 1
cyp.c5' cyp.h51' 1
cyp.c5' cyp.h52' 1
cyp.c4' cyp.c3' 1
cyp.c4' cyp.o4' 1
cyp.c4' cyp.h4' 1
cyp.c3' cyp.c2' 1
cyp.c3' cyp.o3' 1
cyp.c3' cyp.ho3' 1
cyp.c3' cyp.h3' 1
cyp.c2' cyp.c1' 1
cyp.c2' cyp.h21' 1
cyp.c2' cyp.h22' 1
cyp.c1' cyp.o4' 1
cyp.c1' cyp.n1 1
cyp.c1' cyp.h1' 1
cyp.n1 cyp.c2 1
cyp.n1 cyp.c6 1
cyp.c2 cyp.o2 1.5
cyp.c2 cyp.n3 1.5
cyp.n3 cyp.c4 1.5
cyp.n3 cyp.h3 1.
cyp.c4 cyp.n4 1
cyp.n4 cyp.hn41 1
cyp.n4 cyp.hn42 1
cyp.c4 cyp.c5 1.5
cyp.c5 cyp.h5 1
cyp.c5 cyp.c6 1.5
cyp.c6 cyp.h6 1
0
6
cyp.c2' cyp.c4' cyp.o3' cyp.c3' 6 .554654
cyp.c2' cyp.c4' cyp.o3' cyp.H3' 6 1.669313
cyp.c3' cyp.c5' cyp.o4' cyp.c4' 6 .554654
cyp.c3' cyp.c5' cyp.o4' cyp.H4' 6 1.669313
cyp.o4' cyp.c2' cyp.h1' cyp.n1  6 1.925983
cyp.o4' cyp.c2' cyp.h1' cyp.c1' 6 .468722



# CMP  cyt mono phosphate , patched from CYT
